STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8T9U2_SELMLEpimerase domain-containing protein. (329 aa)    
Predicted Functional Partners:
D8RLJ5_SELML
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.835
D8RD32_SELML
S10_plectin domain-containing protein.
   
 0.833
D8SHL8_SELML
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 0.828
D8SVC4_SELML
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.827
D8RMQ2_SELML
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.826
D8RLJ6_SELML
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.823
D8RGU3_SELML
Uncharacterized protein.
   
 0.817
D8S7K0_SELML
Uncharacterized protein.
   
 0.811
D8TF39_SELML
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.798
D8RNS1_SELML
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
  0.793
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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