STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TDL3_SELMLUncharacterized protein. (177 aa)    
Predicted Functional Partners:
D8QRY0_SELML
GIY-YIG domain-containing protein.
   
 0.967
D8QUM8_SELML
LOB domain-containing protein.
   
 0.967
D8SW15_SELML
ERCC4 domain-containing protein.
  
 0.958
D8SWM7_SELML
ERCC4 domain-containing protein.
  
 0.958
D8QRU7_SELML
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.933
D8RJ17_SELML
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.933
D8RQ83_SELML
Uncharacterized protein.
   
 0.920
D8TDH1_SELML
Uncharacterized protein.
   
 0.920
D8QP68_SELML
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.908
D8RIK0_SELML
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.908
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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