STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eptAUnannotated protein. (584 aa)    
Predicted Functional Partners:
GCA_000427365_00938
Unannotated protein.
 
     0.925
GCA_000427365_00939
Unannotated protein.
       0.780
GCA_000427365_01757
Unannotated protein.
  
    0.730
GCA_000427365_00976
Unannotated protein.
  
     0.705
GCA_000427365_00936
Unannotated protein.
       0.631
GCA_000427365_02134
Unannotated protein.
  
   
 0.589
GCA_000427365_01122
Unannotated protein.
  
    0.560
GCA_000427365_00855
Unannotated protein.
  
     0.559
arnT
Unannotated protein.
  
 
 0.555
GCA_000427365_00924
Unannotated protein.
    
 0.548
Your Current Organism:
Rikenella microfusus
NCBI taxonomy Id: 880526
Other names: R. microfusus DSM 15922, Rikenella microfusus ATCC 29728, Rikenella microfusus DSM 15922, Rikenella microfusus JCM 2053, Rikenella microfusus str. DSM 15922, Rikenella microfusus strain DSM 15922
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.