STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0011Chaperone protein clpB. (870 aa)    
Predicted Functional Partners:
EIO_2841
Chaperone protein DnaK.
  
 
 0.984
EIO_1756
Protease subunit of ATP-dependent Clp protease.
 
 0.952
EIO_1229
Phage terminase GpA.
  
 0.945
EIO_0908
ATP-dependent Clp protease adaptor protein clpS.
  
 
 0.910
EIO_2840
Chaperone protein DnaJ.
  
 0.881
EIO_1743
Chaperone protein DnaJ, putative.
  
 0.840
grpE
GrpE protein HSP-70 cofactor, putative.
  
 0.835
EIO_0818
Tetratricopeptide TPR_2 repeat protein.
  
 0.793
groES
groES protein.
  
 
 0.783
EIO_0950
Heat shock protein, Hsp20 family protein.
  
 
 0.762
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.