Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0035LysR family transcriptional regulator. (291 aa)    
Predicted Functional Partners:
EIO_0299
Transcriptional regulator, LysR family.
  
     0.775
EIO_1515
Transcriptional regulatory protein.
  
     0.774
EIO_1452
Transcriptional regulator protein.
  
     0.772
EIO_2106
Transcriptional regulator, LysR family protein.
  
     0.745
EIO_0882
Transcriptional regulator.
  
     0.734
EIO_1424
Transcriptional regulator LysR family precursor.
  
     0.721
EIO_0036
Auxin efflux carrier.
 
     0.632
EIO_0090
Transcriptional regulator, LysR family, putative.
  
     0.550
EIO_2430
Glutamine-pyruvate aminotransferase.
     
 0.533
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.