Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0070Twin-arginine translocation pathway signal. (724 aa)    
Predicted Functional Partners:
EIO_0072
Membrane-bound aldehyde dehydrogenase, small subunit.
 0.999
EIO_0069
Putative exported xanthine dehydrogenase/CoxI family protein.
 
  
 0.967
EIO_0329
Cytochrome c, class I.
  
 0.936
EIO_0071
Hypothetical protein.
      0.924
EIO_0068
Putative xanthine dehydrogenase accessory factor.
 
   
 0.856
xdhA
Xanthine dehydrogenase, A subunit.
 
     0.586
EIO_2479
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein.
      
 0.451
xdhC
Xanthine dehydrogenase accessory protein XdhC.
 
  
 0.435
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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