STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0076Chromosome partitioning protein. (269 aa)    
Predicted Functional Partners:
parB
Chromosome partitioning protein parB.
 
 
 0.833
EIO_0720
TonB-dependent receptor.
    
 
 0.771
EIO_0213
RpsU-divergently transcribed.
  
     0.663
EIO_0077
Hypothetical protein.
       0.636
EIO_0380
Cell division protein FtsZ.
  
  
 0.635
flhA
Flagellar biosynthesis protein FlhA.
  
    0.582
EIO_1388
Lipoprotein, SmpA/OmlA family.
  
     0.581
mreC
Rod shape-determining protein MreC.
  
    0.530
EIO_1216
Conserved hypothetical protein.
  
     0.481
EIO_2680
uroporphyrinogen-III synthase, putative.
  
    0.478
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.