Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0090Transcriptional regulator, LysR family, putative. (292 aa)    
Predicted Functional Partners:
EIO_1515
Transcriptional regulatory protein.
  
     0.600
EIO_2246
Transcriptional regulator, LysR family.
  
     0.567
EIO_2493
Transcriptional regulator, LysR family protein.
  
     0.564
EIO_0088
GCN5-related N-acetyltransferase.
 
     0.557
EIO_0087
GCN5-related N-acetyltransferase.
 
     0.554
EIO_0035
LysR family transcriptional regulator.
  
     0.550
EIO_2430
Glutamine-pyruvate aminotransferase.
     
 0.533
EIO_1940
LysR family transcriptional regulator.
  
     0.524
EIO_1908
Putative transcriptional regulatory protein (nitrogen assimilation control protein).
  
     0.511
EIO_0086
Chorismate mutase.
       0.477
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.