STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0118Malate dehydrogenase. (320 aa)    
Predicted Functional Partners:
EIO_2099
Citrate (Si)-synthase.
  
 0.992
EIO_1646
Fumarase.
  
 0.965
amt-2
Aromatic amino acid aminotransferase.
   
 0.945
pyc
Pyruvate carboxylase.
  
 0.939
EIO_1737
Malate synthase G.
   
 0.937
EIO_0221
Phosphoenolpyruvate carboxykinase.
  
 
 0.930
EIO_2430
Glutamine-pyruvate aminotransferase.
  
 
 0.925
icd
Isocitrate dehydrogenase, NADP-dependent.
  
  
 0.923
EIO_1187
Aspartate aminotransferase.
  
 0.916
EIO_1890
Aspartate aminotransferase.
  
 0.916
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.