STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0148Binding-protein-dependent transport systems inner membrane component. (244 aa)    
Predicted Functional Partners:
EIO_0146
ABC transporter related protein.
 
 
  0.946
EIO_0145
Twin-arginine translocation pathway signal.
 
 
  0.940
EIO_0147
Binding-protein-dependent transport systems inner membrane component.
    
0.940
EIO_1579
Conserved hypothetical protein.
 
 
  0.796
EIO_2067
ABC transporter related protein.
 
 
  0.790
EIO_1664
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
  0.768
EIO_1863
ABC transporter, permease component.
  
     0.758
EIO_1576
ABC transporter ATP-binding protein.
 
 
  0.755
EIO_1825
ABC transporter, ATP-binding protein.
 
 
  0.752
EIO_0149
Conserved hypothetical protein.
 
     0.728
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.