Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0158Phosphate ABC transporter, permease protein. (444 aa)    
Predicted Functional Partners:
pstA
Phosphate ABC transporter, ATP-binding protein.
 0.999
pstC
Phosphate ABC transporter, permease protein PstC.
0.999
EIO_0160
Phosphate ABC transporter, periplasmic phosphate-binding protein.
 
 0.999
phoU
Phosphate transport system regulatory protein PhoU.
 
  
 0.996
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
     
 0.720
EIO_1357
Probable two-component sensor histidine kinase.
  
  
 0.630
EIO_2463
single-stranded-DNA-specific exonuclease RecJ.
      0.627
EIO_2430
Glutamine-pyruvate aminotransferase.
     
 0.568
xanB
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
     
 0.525
pheT
phenylalanyl-tRNA synthetase, beta subunit.
     
 0.525
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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