STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0171Sec-independent protein translocase protein tatB-like protein. (185 aa)    
Predicted Functional Partners:
EIO_0170
Twin-arginine translocation protein, TatA/E family.
  
 0.999
tatC
Twin-arginine translocation protein TatC.
  
 0.999
guaA
GMP synthase.
  
  
 0.962
EIO_0173
Conserved hypothetical protein.
       0.845
EIO_0854
Rhomboid family protein.
  
 
 0.820
EIO_1557
Conserved hypothetical protein.
  
     0.518
EIO_0169
Helix-turn-helix domain containing protein, type 11.
  
    0.507
EIO_1012
Binding-protein-dependent transport systems inner membrane component.
  
   
 0.499
EIO_0753
Glutamine amidotransferase, class I.
 
    0.473
EIO_2706
Translocase.
     
 0.442
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.