STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0177epsK domain protein. (453 aa)    
Predicted Functional Partners:
EIO_0176
Conserved hypothetical protein.
 
  
 0.914
EIO_0178
Possible Histidine triad (HIT) protein.
  
   0.827
EIO_2702
ABC transporter, permease protein.
 
  
 0.793
EIO_1649
Conserved hypothetical protein.
  
 
   0.781
EIO_0831
Conserved hypothetical protein.
 
     0.777
EIO_0486
Conserved hypothetical protein.
  
     0.775
EIO_0743
Conserved hypothetical protein.
  
     0.775
EIO_0810
Conserved hypothetical protein.
  
     0.774
EIO_0933
Conserved hypothetical protein.
  
     0.774
EIO_2695
Nodulation protein H.
     0.774
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.