STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0198Monooxygenase, FAD-binding protein. (381 aa)    
Predicted Functional Partners:
EIO_0197
dnaK suppressor protein, putative.
       0.812
EIO_2291
Conserved hypothetical protein.
   
 0.628
EIO_0213
RpsU-divergently transcribed.
   
 0.621
EIO_2349
Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein.
   
  
 0.598
EIO_0196
Conserved hypothetical protein.
       0.491
EIO_0195
Peptidase, M48 family, putative.
       0.490
EIO_0958
Conserved hypothetical protein.
    
 0.473
EIO_2518
4-hydroxyacetophenone monooxygenase.
 
 
 0.461
EIO_0694
Endonuclease.
    
 0.441
EIO_0692
RNA polymerase, sigma 32 subunit, RpoH.
   
 0.436
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.