STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0200Iron-sulfur cluster assembly family protein. (108 aa)    
Predicted Functional Partners:
EIO_1552
Conserved hypothetical protein.
  
  
 0.836
EIO_1465
Putative aminotransferase.
 
  
 0.787
xth
Exodeoxyribonuclease III.
     
 0.757
EIO_2109
Glutaredoxin-related protein.
 
 0.694
EIO_2225
Heat shock protein DnaJ-like protein.
  
 
 0.694
EIO_2841
Chaperone protein DnaK.
 
 0.674
EIO_0201
Deoxyguanosinetriphosphate triphosphohydrolase, putative.
     
 0.656
EIO_0864
NifU domain protein.
  
 
 0.597
EIO_2214
Aminomethyl transferase family protein.
 
 
 0.576
sufBD
SufBD protein.
  
 
 0.523
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.