STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0216Phosphocarrier protein HPr. (88 aa)    
Predicted Functional Partners:
EIO_0217
PTS system fructose subfamily IIA component.
 
 0.998
EIO_0332
Phosphoenolpyruvate-protein phosphotransferase.
  
 
 
 0.957
EIO_0219
Putative kinase/phosphatase.
 
 
 
 0.906
EIO_0218
Nucleotide-binding protein.
  
  
 0.875
EIO_2690
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.817
EIO_2599
30S ribosomal protein S7.
  
    0.770
EIO_0220
Hypothetical protein.
       0.717
EIO_0221
Phosphoenolpyruvate carboxykinase.
  
  
 0.694
EIO_2600
30S ribosomal protein S12.
  
    0.605
EIO_0456
LacI family transcriptional regulator.
   
 
 0.603
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.