STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0218Nucleotide-binding protein. (307 aa)    
Predicted Functional Partners:
EIO_0219
Putative kinase/phosphatase.
   
 0.943
EIO_0217
PTS system fructose subfamily IIA component.
 
   
 0.887
EIO_0216
Phosphocarrier protein HPr.
  
  
 0.875
EIO_2045
Ribonuclease, Rne/Rng family.
 
 
 
 0.831
EIO_2690
PTS IIA-like nitrogen-regulatory protein PtsN.
  
  
 0.801
rneE
Ribonuclease E, putative.
   
 
 0.791
EIO_0220
Hypothetical protein.
       0.762
EIO_0221
Phosphoenolpyruvate carboxykinase.
       0.641
EIO_2689
Ribosomal subunit interface protein, putative.
 
  
 0.489
EIO_0647
Riboflavin biosynthesis protein RibD.
       0.477
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.