STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0271Peptide/opine/nickel uptake ABC transporter family, ATP-binding protein. (243 aa)    
Predicted Functional Partners:
EIO_0270
Binding-protein-dependent transport systems inner membrane component.
 
  0.989
EIO_0272
ABC transporter-like protein.
 
 
0.987
EIO_0269
Peptide ABC transporter permease.
 
 
  0.967
EIO_0267
Extracellular solute-binding protein family 5.
 
 
  0.965
y4tP
Peptide ABC transporter permease protein y4tP.
 
 
  0.963
EIO_1495
Dipeptide ABC transporter.
 
 
  0.935
EIO_0785
Oligopeptide ABC transporter ATP-binding protein.
 
 
0.925
EIO_1976
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.919
EIO_1500
ABC transporter, nucleotide binding/ATPase protein (oligopeptide).
 
 
0.918
EIO_2471
Oligopeptide ABC transporter, permease protein.
 
 
  0.837
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.