Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0287NADPH:quinone reductase. (325 aa)    
Predicted Functional Partners:
EIO_0285
TetR family transcriptional regulator.
 
   
 0.803
EIO_0692
RNA polymerase, sigma 32 subunit, RpoH.
  
 
 0.803
EIO_0286
OsmC-like protein.
  
  
 0.764
noeK
Phosphomannomutase.
   
 
 0.762
EIO_1848
Non-ribosomal peptide synthase.
  
 0.724
EIO_1849
Peptide synthetase.
  
 0.724
EIO_2047
AMP-binding enzyme, putative.
  
 0.724
EIO_2048
acyl-CoA synthase.
  
 0.724
EIO_2830
Ubiquinol--cytochrome c reductase, cytochrome c1.
   
 
 0.628
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
   
 
  0.607
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.