STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0299Transcriptional regulator, LysR family. (347 aa)    
Predicted Functional Partners:
EIO_0035
LysR family transcriptional regulator.
  
     0.775
EIO_1908
Putative transcriptional regulatory protein (nitrogen assimilation control protein).
  
     0.774
EIO_2493
Transcriptional regulator, LysR family protein.
  
     0.774
EIO_1452
Transcriptional regulator protein.
  
     0.773
EIO_1805
LysR family transcriptional regulator.
  
     0.737
EIO_2246
Transcriptional regulator, LysR family.
  
     0.728
EIO_2106
Transcriptional regulator, LysR family protein.
  
     0.716
EIO_0882
Transcriptional regulator.
  
     0.715
EIO_1424
Transcriptional regulator LysR family precursor.
  
     0.648
EIO_0300
Putative transcriptional regulator, GntR Family.
  
    0.576
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.