Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIO_0307Alcohol dehydrogenase GroES domain protein. (339 aa)    
Predicted Functional Partners:
EIO_1668
Estradiol 17-beta-dehydrogenase 8.
  
 
 0.903
EIO_0306
Extracellular solute-binding protein.
       0.594
EIO_1015
tRNA (guanine-N(7)-)-methyltransferase.
     
  0.587
EIO_0302
2-deoxy-D-gluconate 3-dehydrogenase.
  
 0.532
EIO_0305
ABC transporter related protein.
  
   0.487
EIO_0303
Polar amino acid ABC transporter, inner membrane subunit.
       0.475
EIO_0304
Polar amino acid ABC transporter, inner membrane subunit.
       0.475
EIO_1627
Glycine dehydrogenase.
  
  
 0.438
EIO_1198
5-aminolevulinate synthase.
  
  
 0.409
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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