STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0322Diguanylate cyclase. (659 aa)    
Predicted Functional Partners:
EIO_1789
MCP methyltransferase, CheR-type.
 
 
 0.925
EIO_0502
Probable ammonium transporter, marine subtype.
 
    
 0.882
EIO_1033
GGDEF domain protein.
 
0.801
EIO_1528
Diguanylate cyclase.
 
0.783
EIO_0561
Diguanylate phosphodiesterase.
 
 
0.774
mcpB
Methyl-accepting chemotaxis protein McpB.
 0.726
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.725
EIO_1660
Sensory box/GGDEF family protein.
 
 
 
0.721
EIO_1782
Methyl-accepting chemotaxis protein McpC.
 0.721
EIO_1357
Probable two-component sensor histidine kinase.
  
 
 0.668
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.