STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0348Putative transmembrane cytochrome D ubiquinol oxidase subunit I. (528 aa)    
Predicted Functional Partners:
EIO_0347
Cytochrome d oxidase subunit II.
 0.999
EIO_0346
Cyd operon protein YbgT.
 
 0.991
cydD
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD.
  
 0.987
EIO_0349
Cysteine ABC transporter permease/ATP-binding protein.
  
 0.973
EIO_0686
Cytochrome-c oxidase.
    
 0.914
EIO_2445
Cytochrome c oxidase, aa3-type, subunit I.
    
 0.914
EIO_0772
Cytochrome c oxidase, subunit III.
    
 0.815
qoxB
QoxB, quinol oxidase subunit II.
    
 0.810
EIO_2635
Cytochrome c551.
  
 
 0.797
EIO_2828
Ubiquinol--cytochrome c reductase, cytochrome B.
    
 0.786
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.