STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0359Oxidoreductase, FAD-binding protein. (341 aa)    
Predicted Functional Partners:
EIO_0358
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein.
 
     0.759
EIO_0357
S-adenosylmethionine uptake transporter.
       0.726
EIO_2231
Conserved hypothetical protein.
  
     0.673
EIO_0575
Conserved hypothetical protein.
  
     0.603
EIO_0297
FAD dependent oxidoreductase.
  
     0.541
EIO_0854
Rhomboid family protein.
 
    0.530
EIO_2217
Conserved hypothetical protein.
  
     0.514
EIO_0990
Conserved hypothetical protein.
  
     0.511
apt
Adenine phosphoribosyltransferase.
  
    0.462
EIO_0904
D-alanyl-D-alanine carboxypeptidase family.
  
    0.421
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.