STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0399UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase. (478 aa)    
Predicted Functional Partners:
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
 
0.999
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 0.999
ddl
D-alanine--D-alanine ligase.
 
 0.998
EIO_1728
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
  
 0.984
EIO_0374
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase.
 
  
 0.977
murC
UDP-N-acetylmuramate--alanine ligase.
 
  
 0.970
EIO_1396
Alanine racemase.
   
 0.966
EIO_0397
Stage V sporulation protein D.
  
 0.958
EIO_0373
Cell division protein FtsW.
 
 
 0.901
EIO_0394
MraZ, putative.
 
 
 
 0.874
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.