Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_0401Putative effector of murein hydrolase LrgA; COG1380. (121 aa)    
Predicted Functional Partners:
EIO_0402
Putative inner membrane protein yohK.
 
  
 0.994
EIO_1943
Conserved hypothetical protein.
  
  
 0.841
EIO_0403
Peptidyl-prolyl cis-trans isomerase.
  
    0.688
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
     
 0.611
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase.
       0.608
EIO_0399
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase.
       0.603
EIO_0396
Conserved hypothetical protein.
 
     0.596
EIO_0394
MraZ, putative.
     
 0.524
EIO_0395
S-adenosyl-methyltransferase MraW.
       0.514
EIO_0397
Stage V sporulation protein D.
       0.514
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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