Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0404Alpha/beta hydrolase fold-3 domain protein. (311 aa)    
Predicted Functional Partners:
EIO_2518
4-hydroxyacetophenone monooxygenase.
  
 0.944
EIO_2274
NADH dehydrogenase subunit I.
   
  0.922
nuoF
NADH dehydrogenase I subunit F.
    
  0.919
nuoE
ATP synthase subunit E.
    
  0.919
EIO_0828
Ferredoxin.
    
  0.892
EIO_2284
NADH-quinone oxidoreductase, B subunit.
    
  0.878
EIO_2285
NADH dehydrogenase subunit A.
    
  0.855
EIO_2276
NADH dehydrogenase (quinone), g subunit.
   
 0.842
EIO_2283
NADH dehydrogenase subunit C.
    
  0.839
nuoD
NADH dehydrogenase I, D subunit.
    
  0.792
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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