Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_0414Dihydrolipoamide dehydrogenase. (462 aa)    
Predicted Functional Partners:
EIO_1167
Branched-chain alpha-keto acid dehydrogenase E2 subunit.
 0.999
pdhB
Pyruvate dehydrogenase subunit beta.
 0.999
EIO_0113
Dihydrolipoamide acetyltransferase.
 0.998
EIO_0115
2-oxoglutarate dehydrogenase, E1 component.
  
 0.996
EIO_1169
Pyruvate dehydrogenase (lipoamide).
 
 0.996
EIO_1627
Glycine dehydrogenase.
  
 0.993
EIO_1626
Glycine cleavage system H protein.
 
 
 0.987
sucB
Dihydrolipoamide succinyltransferase.
 0.986
EIO_1625
Glycine cleavage system T protein.
 
 0.983
glyA
Serine hydroxymethyltransferase.
  
 
 0.936
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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