STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0469Putative aspartate-semialdehyde dehydrogenase. (340 aa)    
Predicted Functional Partners:
EIO_0333
Aspartate kinase.
 
 
 0.992
EIO_0509
Dihydrodipicolinate synthase.
 
 
 0.982
EIO_2461
Homoserine dehydrogenase.
 
 0.971
EIO_0310
Diaminopimelate epimerase.
 
  
 0.840
EIO_2842
Dihydrodipicolinate reductase.
 
  
 0.810
EIO_2430
Glutamine-pyruvate aminotransferase.
  
  
 0.781
EIO_0468
Major facilitator superfamily protein.
       0.705
metH
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase.
  
  
 0.693
EIO_0774
L-threonine synthase.
  
 
 0.629
EIO_1301
tRNA-dihydrouridine synthase, putative.
 
    0.613
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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