STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0489Molybdenum cofactor biosynthesis domain protein. (240 aa)    
Predicted Functional Partners:
EIO_0490
GCN5-related N-acetyltransferase.
       0.845
EIO_0491
OmpA domain protein.
       0.845
EIO_1297
Competence/damage-inducible protein CinA domain protein.
   
 0.752
EIO_0488
Methionine aminopeptidase, type I.
       0.607
EIO_0558
Phosphatidylglycerol phosphate synthase.
  
  
 0.567
nadE
Glutamine-dependent NAD(+) synthetase.
     
 0.557
EIO_0628
3-isopropylmalate dehydratase, large subunit.
     
 0.518
yajC
Preprotein translocase, YajC subunit.
 
   
 0.505
metH
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase.
       0.477
recA
Recombinase A.
  
  
 0.457
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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