Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0502Probable ammonium transporter, marine subtype. (449 aa)    
Predicted Functional Partners:
EIO_0501
Nitrogen regulatory protein P-II.
 
 0.999
glnB-1
Nitrogen regulatory protein P-II.
 
 0.998
EIO_0561
Diguanylate phosphodiesterase.
     0.899
EIO_1660
Sensory box/GGDEF family protein.
 
      0.892
EIO_0322
Diguanylate cyclase.
 
    
 0.886
EIO_2430
Glutamine-pyruvate aminotransferase.
 
  
 0.881
ntrB
Nitrogen regulation protein NtrB.
  
 
 0.753
EIO_2432
Glutamate synthase.
 
  
 0.625
nadE
Glutamine-dependent NAD(+) synthetase.
     
 0.571
mrcB
Glycosyl transferase family protein.
       0.519
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.