STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0504SsrA-binding protein. (157 aa)    
Predicted Functional Partners:
rpsO
Ribosomal protein S15.
 
 
 
 0.968
EIO_0082
50S ribosomal protein L19.
 
 
 0.958
EIO_0206
50S ribosomal protein L20.
 
 
 0.952
rplM
Ribosomal protein L13.
 
 
 0.948
rpsB
30S ribosomal protein S2.
 
 
 0.944
rpsK
30S ribosomal protein S11.
  
 
 0.944
rpsE
30S ribosomal protein S5.
   
 
 0.944
rpsM
Ribosomal protein S13p/S18e.
 
 
 
 0.943
rpsD
Ribosomal protein S4.
 
 
 0.942
rpsI
30S ribosomal protein S9.
   
 
 0.942
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.