STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0505Cytochrome c subfamily. (146 aa)    
Predicted Functional Partners:
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
 
 0.982
EIO_2830
Ubiquinol--cytochrome c reductase, cytochrome c1.
 
 0.982
EIO_0898
Cytochrome c, class I.
  
  
  0.966
EIO_0012
Sulfoxide reductase catalytic subunit.
  
 
 0.781
EIO_2597
Elongation factor Tu.
  
 
 0.778
tuf
Elongation factor Tu.
  
 
 0.778
crtK
Protein CrtK.
  
  
 0.690
EIO_0686
Cytochrome-c oxidase.
  
 0.685
EIO_2445
Cytochrome c oxidase, aa3-type, subunit I.
  
 0.685
fbcB
Cytochrome b.
 
 0.675
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.