Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EIO_0508Isopentenyl-diphosphate delta-isomerase. (162 aa)    
Predicted Functional Partners:
EIO_0315
Geranylgeranyl pyrophosphate synthetase.
  
 
 0.942
EIO_0507
Dipeptidase AC, Metallo peptidase, MEROPS family M19.
       0.746
EIO_0509
Dihydrodipicolinate synthase.
  
    0.690
EIO_1072
Conserved hypothetical protein.
  
  
 0.592
EIO_1299
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/ 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
      
 0.455
EIO_1566
1-deoxy-D-xylulose 5-phosphate reductoisomerase.
      
 0.455
EIO_0510
Putative soluble lytic transglycosylase.
       0.454
dxs
1-deoxy-D-xylulose-5-phosphate synthase.
     
 0.446
EIO_0566
Putative 4-diphosphocytidyl-2C-methyl-D-erythritol kinase.
     
 0.427
EIO_1781
DNA topoisomerase I.
     
 0.416
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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