Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0565Decaprenyl diphosphate synthase. (325 aa)    
Predicted Functional Partners:
EIO_1568
Undecaprenyl diphosphate synthase.
 
 
 0.990
EIO_0577
4-hydroxybenzoate polyprenyl transferase.
 
 
 0.933
EIO_0315
Geranylgeranyl pyrophosphate synthetase.
 
 
0.925
EIO_1072
Conserved hypothetical protein.
  
 0.915
EIO_2291
Conserved hypothetical protein.
  
 0.734
EIO_0213
RpsU-divergently transcribed.
   
 
 0.721
EIO_0564
N-6 Adenine-specific DNA methylase.
       0.718
ubiE
Ubiquinone biosynthesis methyltransferase Coq5, precursor.
 
 
 0.656
EIO_2266
Metallo-beta-lactamase family protein.
  
    0.645
EIO_0563
Conserved hypothetical protein.
       0.616
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.