Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIO_0582Amidohydrolase family, putative. (434 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase.
 0.999
carA
Carbamoyl-phosphate synthase, small subunit.
  
 0.990
EIO_2158
Dihydroorotate dehydrogenase 2.
 
 0.988
carB
Carbamoyl-phosphate synthase large subunit.
 
 0.987
EIO_1399
Dihydroorotase, homodimeric type.
    
 0.911
EIO_1050
Dihydroorotase.
     
  0.900
pyrF
Orotidine 5'-phosphate decarboxylase.
 
  
 0.898
pyrE
Orotate phosphoribosyltransferase.
 
  
 0.887
EIO_0581
Glycerol-3-phosphate acyltransferase.
 
     0.873
EIO_0584
Conserved hypothetical protein.
       0.588
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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