Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0591MJ0042 family finger-like protein. (228 aa)    
Predicted Functional Partners:
ftsX
Cell division protein FtsX.
 
     0.743
EIO_0588
Acyltransferase family protein.
       0.696
ftsE
Cell division ATP-binding protein FtsE.
       0.696
EIO_2695
Nodulation protein H.
  
     0.647
EIO_1093
Periplasmic sensor signal transduction histidine kinase.
  
     0.606
EIO_0563
Conserved hypothetical protein.
  
     0.576
EIO_2440
Conserved hypothetical protein.
  
     0.554
EIO_1079
Conserved hypothetical protein.
  
     0.549
EIO_1741
Conserved hypothetical protein.
  
     0.542
EIO_2696
core-2/I-branching enzyme family protein.
  
     0.528
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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