STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0612Formyltetrahydrofolate deformylase protein. (294 aa)    
Predicted Functional Partners:
EIO_2070
Methylenetetrahydrofolate dehydrogenase (NADP(+)).
  
 
 0.946
EIO_2073
FolD bifunctional protein.
  
 
 0.946
folD
Bifunctional protein FolD 2.
  
 
 0.946
glyA
Serine hydroxymethyltransferase.
  
 
 0.940
EIO_1625
Glycine cleavage system T protein.
  
 
 0.931
EIO_1282
Phosphoribosylglycinamide formyltransferase.
 
  
0.926
metH
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.917
thyX
Thymidylate synthase ThyX.
     
  0.900
EIO_1646
Fumarase.
    
  0.803
EIO_0118
Malate dehydrogenase.
    
  0.800
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.