Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIO_0617Aminotransferase, class I and II. (401 aa)    
Predicted Functional Partners:
metH
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.938
EIO_1037
O-succinylhomoserine sulfhydrylase.
 
 
 0.937
EIO_1794
Aspartate/tyrosine/aromatic aminotransferase protein.
  
  
 
0.923
EIO_1187
Aspartate aminotransferase.
 
  
 0.922
EIO_1639
Putative cysteine synthase A.
    
 0.919
EIO_1890
Aspartate aminotransferase.
 
  
0.909
EIO_2303
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
    
 0.902
EIO_0065
Rhodanese domain-containing protein.
     
  0.900
amt-2
Aromatic amino acid aminotransferase.
     
  0.900
EIO_2298
Rhodanese domain protein.
     
  0.900
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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