STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0636Sialic acid TRAP transporter permease protein siaT. (428 aa)    
Predicted Functional Partners:
EIO_0634
Putative transport protein.
 
 
 0.947
EIO_1810
Sialic acid TRAP transporter permease protein siaT.
  
  
 
0.922
EIO_0635
TRAP-type transport system, small permease component.
 
    0.918
EIO_2523
TRAP dicarboxylate transporter, DctM subunit.
  
  
 
0.911
EIO_1809
2,3-diketo-L-gulonate-binding periplasmic protein.
 
 
 0.806
EIO_0030
C4-dicarboxylate-binding periplasmic protein.
 
 
 0.794
EIO_0034
C4-dicarboxylate-binding periplasmic protein.
 
 
 0.788
EIO_0638
5-oxoprolinase (ATP-hydrolyzing).
       0.776
EIO_2713
TRAP family transporter, periplasmic substrate binding subunit.
 
 
 0.776
EIO_0637
Hypothetical protein.
       0.773
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.