Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_0650Riboflavin synthase, beta subunit. (144 aa)    
Predicted Functional Partners:
EIO_0649
3,4-Dihydroy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II.
 
 0.999
ribE-2
Riboflavin synthase subunit alpha.
 
 0.999
EIO_0647
Riboflavin biosynthesis protein RibD.
 
 0.998
EIO_0648
GTP cyclohydrolase II.
  
  0.998
metK
S-adenosylmethionine synthetase.
  
 
 0.939
nusB
Putative N utilization substance protein B.
  
  
 0.935
mscL
Large-conductance mechanosensitive channel.
  
  
 0.904
EIO_0418
50S ribosomal protein L21.
   
    0.846
pyrB
Aspartate carbamoyltransferase.
  
    0.805
EIO_1294
Inosine-5'-monophosphate dehydrogenase.
  
 
 0.805
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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