STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0653Sorbose dehydrogenase. (578 aa)    
Predicted Functional Partners:
EIO_2382
Aldehyde dehydrogenase.
   
 
 0.901
ald
Aldehyde dehydrogenase family protein, putative.
   
 
 0.900
pqqB
Pyrroloquinoline quinone biosynthesis protein PqqB.
 
  
 0.778
pqqC
Pyrroloquinoline quinone biosynthesis protein PqqC.
 
  
 0.776
pqqE
Pyrroloquinoline quinone biosynthesis protein PqqE.
 
  
 0.758
pqqD
Coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)(PqqD).
 
  
 0.653
EIO_1126
ABC-2 type transporter.
 
     0.536
EIO_2635
Cytochrome c551.
 
     0.533
EIO_0652
DNA-binding protein transcriptional activator, 3HPP-binding protein.
   
   0.515
EIO_0654
Putative aldo/keto reductase protein.
       0.465
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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