Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EIO_0653Sorbose dehydrogenase. (578 aa)    
Predicted Functional Partners:
ald
Aldehyde dehydrogenase family protein, putative.
   
 
 0.901
EIO_2382
Aldehyde dehydrogenase.
   
 
 0.901
pqqB
Pyrroloquinoline quinone biosynthesis protein PqqB.
 
  
 0.783
pqqC
Pyrroloquinoline quinone biosynthesis protein PqqC.
 
  
 0.778
pqqE
Pyrroloquinoline quinone biosynthesis protein PqqE.
 
  
 0.761
pqqD
Coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)(PqqD).
 
  
 0.655
EIO_2635
Cytochrome c551.
 
   
 0.589
EIO_1126
ABC-2 type transporter.
  
     0.536
EIO_0652
DNA-binding protein transcriptional activator, 3HPP-binding protein.
   
   0.512
EIO_0654
Putative aldo/keto reductase protein.
       0.465
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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