STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0670Conserved hypothetical protein. (405 aa)    
Predicted Functional Partners:
lolE
Lipoprotein releasing system transmembrane protein LolE.
  
 0.950
EIO_2789
Twin-arginine translocation pathway signal.
   
 
 0.828
EIO_0671
Periplasmic solute binding protein.
 
  
 0.794
EIO_1020
Putative ABC transporter, inner membrane subunit.
  
 
 0.755
EIO_0343
Solvent efflux pump periplasmic linker srpA.
  
 0.610
hlyD
Type I secretion membrane fusion protein, HlyD.
  
 0.610
EIO_0532
Protein secretion protein.
  
 0.610
EIO_0533
Secretion protein HlyD.
  
 0.610
EIO_1315
RND family efflux transporter MFP subunit.
  
 0.610
EIO_1711
NolF secretion protein.
  
 0.610
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.