STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0686Cytochrome-c oxidase. (819 aa)    
Predicted Functional Partners:
qoxB
QoxB, quinol oxidase subunit II.
 
 0.999
ctaC
Cytochrome c oxidase, subunit II.
 0.999
EIO_0772
Cytochrome c oxidase, subunit III.
 0.999
EIO_0768
Protoheme IX farnesyltransferase.
 0.997
cyoE
Protoheme IX farnesyltransferase.
 
 0.993
EIO_2828
Ubiquinol--cytochrome c reductase, cytochrome B.
 
 0.986
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
  
 0.977
EIO_2830
Ubiquinol--cytochrome c reductase, cytochrome c1.
  
 0.976
fbcB
Cytochrome b.
  
 0.966
EIO_2275
Respiratory-chain NADH dehydrogenase, subunit 1.
  
 
 0.957
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.