STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0716ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit. (236 aa)    
Predicted Functional Partners:
EIO_0717
ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit.
 0.986
EIO_0718
ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit.
 
 0.982
EIO_0719
Periplasmic binding protein.
 
 0.981
EIO_0720
TonB-dependent receptor.
 
     0.948
EIO_0162
Transport system permease protein.
 0.917
EIO_0435
Fe(3+)-citrate import system permease protein yfmD.
 
 0.884
EIO_0434
ABC transporter permease protein.
 
 0.878
EIO_1260
Transport system permease protein.
 
 0.873
EIO_0432
ABC-type enterobactin transport system, permease component.
 
 
 0.758
EIO_0433
Transport system permease protein.
 
 
 0.697
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.