STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0761Putative preprotein translocase. (122 aa)    
Predicted Functional Partners:
secE
Preprotein translocase, SecE subunit.
 
 0.999
secY
Preprotein translocase SecY.
   
 0.998
EIO_2706
Translocase.
   
 0.998
oxaA
Inner membrane protein oxaA, putative.
   
 0.994
EIO_1035
Signal recognition particle-docking protein FtsY.
   
 0.973
EIO_0089
Signal recognition particle protein.
    
 0.971
yajC
Preprotein translocase, YajC subunit.
  
 
 0.960
rplM
Ribosomal protein L13.
  
 
 0.935
EIO_2759
Preprotein translocase subunit SecB.
   
 
 0.932
EIO_0418
50S ribosomal protein L21.
  
 
 0.927
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.