STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tldDTldD protein. (473 aa)    
Predicted Functional Partners:
EIO_2810
PmbA.
 
 
0.916
ctaC
Cytochrome c oxidase, subunit II.
       0.679
EIO_0768
Protoheme IX farnesyltransferase.
       0.596
ctaG
Cytochrome C oxidase assembly protein.
       0.589
EIO_0770
Conserved hypothetical protein.
       0.528
EIO_0247
Peptidyl-dipeptidase, putative.
  
   
 0.525
EIO_0772
Cytochrome c oxidase, subunit III.
       0.512
ksgA
Dimethyladenosine transferase.
     
 0.438
dprA
DNA processing protein DprA, putative.
       0.435
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.