STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0775Peptidase, M16 family protein. (421 aa)    
Predicted Functional Partners:
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
 
 
 0.987
EIO_0772
Cytochrome c oxidase, subunit III.
   
 0.963
EIO_2830
Ubiquinol--cytochrome c reductase, cytochrome c1.
   
 0.959
ctaC
Cytochrome c oxidase, subunit II.
   
 0.933
nuoF
NADH dehydrogenase I subunit F.
   
 
 0.899
EIO_0777
FAD linked oxidase, C-terminal domain protein.
  
  0.889
surf-1
SURF1 protein.
   
 
 0.877
EIO_2274
NADH dehydrogenase subunit I.
  
 
 0.862
EIO_2276
NADH dehydrogenase (quinone), g subunit.
   
 
 0.862
EIO_0686
Cytochrome-c oxidase.
   
 0.859
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.