Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EIO_0777FAD linked oxidase, C-terminal domain protein. (472 aa)    
Predicted Functional Partners:
EIO_0775
Peptidase, M16 family protein.
  
  0.897
EIO_0774
L-threonine synthase.
  
 
 0.803
surf-1
SURF1 protein.
  
    0.781
EIO_0776
Acetyltransferase, gnat family.
       0.774
EIO_0215
Electron transfer flavoprotein, alpha subunit.
 
 
 0.718
EIO_0214
Electron transfer flavoprotein, beta subunit.
 
 
 0.699
EIO_2430
Glutamine-pyruvate aminotransferase.
     
 0.553
EIO_0772
Cytochrome c oxidase, subunit III.
     
 0.540
EIO_0768
Protoheme IX farnesyltransferase.
  
    0.490
cyoE
Protoheme IX farnesyltransferase.
  
    0.490
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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