STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0777FAD linked oxidase, C-terminal domain protein. (472 aa)    
Predicted Functional Partners:
EIO_0775
Peptidase, M16 family protein.
  
  0.889
EIO_0774
L-threonine synthase.
  
 
 0.813
surf-1
SURF1 protein.
  
    0.783
EIO_0776
Acetyltransferase, gnat family.
       0.783
EIO_0214
Electron transfer flavoprotein, beta subunit.
 
 
 0.679
EIO_0215
Electron transfer flavoprotein, alpha subunit.
 
 
 0.663
EIO_2430
Glutamine-pyruvate aminotransferase.
     
 0.605
EIO_0550
Acyltransferase family protein.
    
 0.601
EIO_0772
Cytochrome c oxidase, subunit III.
     
 0.554
EIO_0577
4-hydroxybenzoate polyprenyl transferase.
    
 0.518
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.