STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0791Alpha/beta fold family hydrolase/acetyltransferase-like protein. (245 aa)    
Predicted Functional Partners:
EIO_0792
Primosomal protein N', putative.
       0.773
EIO_0790
threonyl-tRNA synthetase.
  
    0.684
EIO_1119
ETC complex I subunit conserved region.
  
     0.633
EIO_0692
RNA polymerase, sigma 32 subunit, RpoH.
  
 0.632
EIO_0793
Peptide methionine sulfoxide reductase.
   
 
 0.595
EIO_0794
Ribosomal protein L11 methyltransferase.
  
    0.540
EIO_0645
NAD-dependent epimerase/dehydratase.
  
  0.506
EIO_1754
NADH-ubiquinone oxidoreductase.
  
     0.484
rpsF
30S ribosomal protein S6.
 
 
  0.472
rpsP
Ribosomal protein S16.
 
  
  0.466
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.